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Changelog

v2.0.0

  • REMOVE: Whole genome method
  • Only FooDB based analyses will be maintained with diet-microbe or diet-microbe-host patterns being identified

v1.2.0

  • ADD: host to network creation and pattern identification
  • ADD: metabolome comparison to the snakemake workflow
  • UPDATE: changed graph results report to show only most and least restrictive results rather than pattern specific results
  • UPDATE: unit tests are now automatically run with a push to main through GitHub Actions

v1.0.11

  • Minor bug fixes for Whole Genome part of the pipeline

v1.0.9

  • Added version tracking to documentation

v1.0.0

  • Initial release of DietMicrobeNet
  • Supports diet-microbe interaction analysis
  • Includes foodb and whole genome workflows